Create a summary table from an ensemble table

Source: R/createModel.R

Create a summary table from an ensemble table

createSummaryTableFromEnsembleTable(
  L,
  paleo.or.chron = "chronData",
  paleo.or.chron.num = NA,
  model.num = NA,
  ens.table.num = NA,
  ens.var = "ageEnsemble",
  probs = c(0.025, 0.25, 0.5, 0.75, 0.975),
  prob.vars = c("unc2.5", "unc25", "ageMedian", "unc75", "unc97.5"),
  depth.var = "depth"
)

Arguments

L

A LiPD object - an R serialization of a single LiPD file. It's a list, and is typically created by `readLipd()`

paleo.or.chron

"paleoData" or "chronData"

paleo.or.chron.num

an integer that corresponds to paleo.num or chron Data object (L$<paleo.or.chron>[[?]]) has the variable you want?

model.num

an integer that corresponds to model.num that has the variable you want

ens.table.num

an integer that corresponds to ensembleTable you want to get the variable from?

ens.var

The name of the ensemble variable (default = "ageEnsemble")

probs

A vector of probabilites (quantiles) should be computed for the summary? (default = c(0.025,0.25,.5,.75,.975))

prob.vars

A vector of variableNames for the probabilites in probs (default = c("unc2.5","unc25","ageMedian","unc75","unc97.5"))

depth.var

The name of the depth (or position) variable in the ensemble table (default = "depth")

Value

A LiPD object with an added ensemble table